• Descriptive
    • Moments
    • Concentration
    • Central Tendency
    • Variability
    • Stem-and-Leaf Plot
    • Histogram & Frequency Table
    • Data Quality Forensics
    • Conditional EDA
    • Quantiles
    • Kernel Density Estimation
    • Normal QQ Plot
    • Bootstrap Plot

    • Multivariate Descriptive Statistics
  • Distributions
    • Binomial Probabilities
    • Geometric Probabilities
    • Negative Binomial Probabilities
    • Hypergeometric Probabilities
    • Multinomial Probabilities
    • Dirichlet
    • Poisson Probabilities

    • Exponential
    • Gamma
    • Erlang
    • Weibull
    • Rayleigh
    • Maxwell-Boltzmann
    • Lognormal
    • Pareto
    • Inverse Gamma
    • Inverse Chi-Square

    • Beta
    • Power
    • Beta Prime (Inv. Beta)
    • Triangular

    • Normal (area)
    • Logistic
    • Laplace
    • Cauchy (standard)
    • Cauchy (location-scale)
    • Gumbel
    • Fréchet
    • Generalized Extreme Value

    • Normal RNG
    • ML Fitting
    • Tukey Lambda PPCC
    • Box-Cox Normality Plot
    • Noncentral t
    • Noncentral F
    • Sample Correlation r

    • Empirical Tests
  • Hypotheses
    • Theoretical Aspects of Hypothesis Testing
    • Bayesian Inference
    • Minimum Sample Size

    • Empirical Tests
    • Multivariate (pair-wise) Testing
  • Models
    • Manual Model Building
    • Guided Model Building
  • Time Series
    • Time Series Plot
    • Decomposition
    • Exponential Smoothing

    • Blocked Bootstrap Plot
    • Mean Plot
    • (P)ACF
    • VRM
    • Standard Deviation-Mean Plot
    • Spectral Analysis
    • ARIMA

    • Cross Correlation Function
    • Granger Causality
  1. Descriptive Statistics & Exploratory Data Analysis
  2. 70  Scatterplot
  • Preface
  • Getting Started
    • 1  Introduction
    • 2  Why Do We Need Innovative Technology?
    • 3  Basic Definitions
    • 4  The Big Picture: Why We Analyze Data
  • Introduction to Probability
    • 5  Definitions of Probability
    • 6  Jeffreys’ axiom system
    • 7  Bayes’ Theorem
    • 8  Sensitivity and Specificity
    • 9  Naive Bayes Classifier
    • 10  Law of Large Numbers

    • 11  Problems
  • Probability Distributions
    • 12  Bernoulli Distribution
    • 13  Binomial Distribution
    • 14  Geometric Distribution
    • 15  Negative Binomial Distribution
    • 16  Hypergeometric Distribution
    • 17  Multinomial Distribution
    • 18  Poisson Distribution

    • 19  Uniform Distribution (Rectangular Distribution)
    • 20  Normal Distribution (Gaussian Distribution)
    • 21  Gaussian Naive Bayes Classifier
    • 22  Chi Distribution
    • 23  Chi-squared Distribution (1 parameter)
    • 24  Chi-squared Distribution (2 parameters)
    • 25  Student t-Distribution
    • 26  Fisher F-Distribution
    • 27  Exponential Distribution
    • 28  Lognormal Distribution
    • 29  Gamma Distribution
    • 30  Beta Distribution
    • 31  Weibull Distribution
    • 32  Pareto Distribution
    • 33  Inverse Gamma Distribution
    • 34  Rayleigh Distribution
    • 35  Erlang Distribution
    • 36  Logistic Distribution
    • 37  Laplace Distribution
    • 38  Gumbel Distribution
    • 39  Cauchy Distribution
    • 40  Triangular Distribution
    • 41  Power Distribution
    • 42  Beta Prime Distribution
    • 43  Sample Correlation Distribution
    • 44  Dirichlet Distribution
    • 45  Generalized Extreme Value (GEV) Distribution
    • 46  Frechet Distribution
    • 47  Noncentral t Distribution
    • 48  Noncentral F Distribution
    • 49  Inverse Chi-Squared Distribution
    • 50  Maxwell-Boltzmann Distribution
    • 51  Distribution Relationship Map

    • 52  Problems
  • Descriptive Statistics & Exploratory Data Analysis
    • 53  Types of Data
    • 54  Datasheets

    • 55  Frequency Plot (Bar Plot)
    • 56  Frequency Table
    • 57  Contingency Table
    • 58  Binomial Classification Metrics
    • 59  Confusion Matrix
    • 60  ROC Analysis

    • 61  Stem-and-Leaf Plot
    • 62  Histogram
    • 63  Data Quality Forensics
    • 64  Quantiles
    • 65  Central Tendency
    • 66  Variability
    • 67  Skewness & Kurtosis
    • 68  Concentration
    • 69  Notched Boxplot
    • 70  Scatterplot
    • 71  Pearson Correlation
    • 72  Rank Correlation
    • 73  Partial Pearson Correlation
    • 74  Simple Linear Regression
    • 75  Moments
    • 76  Quantile-Quantile Plot (QQ Plot)
    • 77  Normal Probability Plot
    • 78  Probability Plot Correlation Coefficient Plot (PPCC Plot)
    • 79  Box-Cox Normality Plot
    • 80  Kernel Density Estimation
    • 81  Bivariate Kernel Density Plot
    • 82  Conditional EDA: Panel Diagnostics
    • 83  Bootstrap Plot (Central Tendency)
    • 84  Survey Scores Rank Order Comparison
    • 85  Cronbach Alpha

    • 86  Equi-distant Time Series
    • 87  Time Series Plot (Run Sequence Plot)
    • 88  Mean Plot
    • 89  Blocked Bootstrap Plot (Central Tendency)
    • 90  Standard Deviation-Mean Plot
    • 91  Variance Reduction Matrix
    • 92  (Partial) Autocorrelation Function
    • 93  Periodogram & Cumulative Periodogram

    • 94  Problems
  • Hypothesis Testing
    • 95  Normal Distributions revisited
    • 96  The Population
    • 97  The Sample
    • 98  The One-Sided Hypothesis Test
    • 99  The Two-Sided Hypothesis Test
    • 100  When to use a one-sided or two-sided test?
    • 101  What if \(\sigma\) is unknown?
    • 102  The Central Limit Theorem (revisited)
    • 103  Statistical Test of the Population Mean with known Variance
    • 104  Statistical Test of the Population Mean with unknown Variance
    • 105  Statistical Test of the Variance
    • 106  Statistical Test of the Population Proportion
    • 107  Statistical Test of the Standard Deviation \(\sigma\)
    • 108  Statistical Test of the difference between Means -- Independent/Unpaired Samples
    • 109  Statistical Test of the difference between Means -- Dependent/Paired Samples
    • 110  Statistical Test of the difference between Variances -- Independent/Unpaired Samples

    • 111  Hypothesis Testing for Research Purposes
    • 112  Decision Thresholds, Alpha, and Confidence Levels
    • 113  Bayesian Inference for Decision-Making
    • 114  One Sample t-Test
    • 115  Skewness & Kurtosis Tests
    • 116  Paired Two Sample t-Test
    • 117  Wilcoxon Signed-Rank Test
    • 118  Unpaired Two Sample t-Test
    • 119  Unpaired Two Sample Welch Test
    • 120  Two One-Sided Tests (TOST) for Equivalence
    • 121  Mann-Whitney U test (Wilcoxon Rank-Sum Test)
    • 122  Bayesian Two Sample Test
    • 123  Median Test based on Notched Boxplots
    • 124  Chi-Squared Tests for Count Data
    • 125  Kolmogorov-Smirnov Test
    • 126  One Way Analysis of Variance (1-way ANOVA)
    • 127  Kruskal-Wallis Test
    • 128  Two Way Analysis of Variance (2-way ANOVA)
    • 129  Repeated Measures ANOVA
    • 130  Friedman Test
    • 131  Testing Correlations
    • 132  A Note on Causality

    • 133  Problems
  • Regression Models
    • 134  Simple Linear Regression Model (SLRM)
    • 135  Multiple Linear Regression Model (MLRM)
    • 136  Logistic Regression
    • 137  Generalized Linear Models
    • 138  Multinomial and Ordinal Logistic Regression
    • 139  Cox Proportional Hazards Regression
    • 140  Conditional Inference Trees
    • 141  Leaf Diagnostics for Conditional Inference Trees
    • 142  Conditional Random Forests
    • 143  Hypothesis Testing with Linear Regression Models (from a Practical Point of View)

    • 144  Problems
  • Introduction to Time Series Analysis
    • 145  Case: the Market of Health and Personal Care Products
    • 146  Decomposition of Time Series
    • 147  Ad hoc Forecasting of Time Series
  • Box-Jenkins Analysis
    • 148  Introduction to Box-Jenkins Analysis
    • 149  Theoretical Concepts
    • 150  Stationarity
    • 151  Identifying ARMA parameters
    • 152  Estimating ARMA Parameters and Residual Diagnostics
    • 153  Forecasting with ARIMA models
    • 154  Intervention Analysis
    • 155  Cross-Correlation Function
    • 156  Transfer Function Noise Models
    • 157  General-to-Specific Modeling
  • Model Building Strategies
    • 158  Introduction to Model Building Strategies
    • 159  Manual Model Building
    • 160  Model Validation
    • 161  Regularization Methods
    • 162  Hyperparameter Optimization Strategies
    • 163  Guided Model Building in Practice
    • 164  Diagnostics, Revision, and Guided Forecasting
    • 165  Leakage, Target Encoding, and Robust Regression
  • References
  • Appendices
    • Appendices
    • A  Method Selection Guide
    • B  Presentations and Teaching Materials
    • C  R Language Concepts for Statistical Computing
    • D  Matrix Algebra
    • E  Standard Normal Table (Gaussian Table)
    • F  Critical values of Student’s \(t\) distribution with \(\nu\) degrees of freedom
    • G  Upper-tail critical values of the \(\chi^2\)-distribution with \(\nu\) degrees of freedom
    • H  Lower-tail critical values of the \(\chi^2\)-distribution with \(\nu\) degrees of freedom

Table of contents

  • 70.1 Definition
  • 70.2 Horizontal axis
  • 70.3 Vertical axis
  • 70.4 R Module
    • 70.4.1 Public website
    • 70.4.2 RFC
  • 70.5 Purpose
  • 70.6 Pros & Cons
    • 70.6.1 Pros
    • 70.6.2 Cons
  • 70.7 Example
  • 70.8 Task
  1. Descriptive Statistics & Exploratory Data Analysis
  2. 70  Scatterplot

70  Scatterplot

70.1 Definition

The Scatterplot is used to visualise a bivariate dataset (i.e. a dataset containing two variables \(x\) and \(y\)) by plotting each observation as a point on a two dimensional chart. Each point is defined by its coordinates \((x_i,y_i)\) for \(i = 1, 2, 3, …, n\) where \(n\) is the number of observations.

70.2 Horizontal axis

The horizontal axis represents the values for the \(x\) variable.

70.3 Vertical axis

The vertical axis represents the value for the \(y\) variable.

70.4 R Module

The Scatterplot is not available as a separate module but has been integrated into the Correlation module. This is because the Scatterplot is usually used in combination with Correlations and Linear Regression Models.

70.4.1 Public website

The Scatterplot module can be found on the public website:

  • https://compute.wessa.net/corr.wasp

70.4.2 RFC

The Scatterplot module is available in RFC under the menu item “Descriptive / Multivariate Descriptive Statistics”.

If you prefer to compute the Scatterplot on your local machine, the following script can be used in the R console:

x <- runif(n = 100, min = 1, max = 100)
y <- 3.2*x + rnorm(n = 100, mean = 0, sd = 12)
ylab = 'y'
xlab = 'x'
main = 'Scatterplot and histograms'
histx <- hist(x, plot=FALSE)
histy <- hist(y, plot=FALSE)
maxcounts <- max(c(histx$counts, histy$counts))
xrange <- c(min(x),max(x))
yrange <- c(min(y),max(y))
nf <- layout(matrix(c(2,0,1,3),2,2,byrow=TRUE), c(3,1), c(1,3), TRUE)
par(mar=c(4,4,1,1))
plot(x, y, xlim=xrange, ylim=yrange, xlab=xlab, ylab=ylab, sub=main)
par(mar=c(0,4,1,1))
barplot(histx$counts, axes=FALSE, ylim=c(0, maxcounts), space=0)
par(mar=c(4,0,1,1))
barplot(histy$counts, axes=FALSE, xlim=c(0, maxcounts), space=0, horiz=TRUE)

cor.test(x, y, method = "pearson")

    Pearson's product-moment correlation

data:  x and y
t = 82.683, df = 98, p-value < 2.2e-16
alternative hypothesis: true correlation is not equal to 0
95 percent confidence interval:
 0.9894605 0.9952316
sample estimates:
      cor 
0.9929088 

To compute the Scatterplot, the R code uses a combination of a scatterplot (produced by the plot function) and two barplot functions that are used to display the Histogram of both variables under investigation. The script also shows the Pearson Correlation Coefficient and the accompanying Hypothesis Test (see Hypothesis Testing).

70.5 Purpose

The Scatterplot is often used as an exploratory tool -- i.e. to visualize the relationship between two quantitative variables.

70.6 Pros & Cons

70.6.1 Pros

The Scatterplot has the following advantages:

  • it very easy to compute (even with most spreadsheets)
  • it is easily understood by most readers
  • it allows the researcher to identify the shape of the relationship between both variables (e.g. linear versus non-linear)

70.6.2 Cons

The Scatterplot has the following disadvantages:

  • it is not suited to investigate the relationships between variables with discrete values
  • it does not always display the true nature of the relationship between both variables
  • when the number of observations is large, overplotting can obscure the true density of observations; the Bivariate Kernel Density Plot (see Chapter 81) provides a better alternative in such cases

70.7 Example

The scatterplot shown below illustrates the Scatterplot for the US coffee retail prices versus the prices of imported Arabica from Colombia. The Scatterplot has been extended by adding the Histogram of both variables (this is usually not found in Scatterplots).

Interactive Shiny app (click to load).
Open in new tab

The Scatterplot seems to suggest that there is a positive relationship between both variables (i.e. US retail prices seem to covary with import prices). The plot also shows that there are certain regions with a high density of points (other regions have a low density).

70.8 Task

In the R module shown above:

  • click on the Input tab
  • select AMS in the Stored Data dropdown box
  • click on the Correlations tab
  • now select Q1_1 and Q1_2 in the Select Variables box

Now examine the Scatterplot for the two discrete variables and explain the problems that you see.

69  Notched Boxplot
71  Pearson Correlation

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